Papers Published by Dr. Brahmachari’s Students, Associates and Group:
Papers published by his students, associates and group where SKB is not an author are presented here.
- A new polymer supported packing material as a substitute of Hydroxylapatite:Purification of Topoisomerases. K.Majumder and N.Ramesh. Chromatographia (1987) 24: 400
- Preparation and characterisation of a new Matrix: Polymer supported Hydroxlapatite Substitute. Majumder, K.
Biol.Chem. Hoppe-Seyler (1987) 368: 760
- Screening of clones containing altered DNA conformations by plasmid topoprofile shift. N.Ramesh and R.K.Mishra.
J.Biochem.Biophys.Meth. (1991) 22: 171
- Hereditary ataxia with ophthalmoplegia-preliminary observations on a Bengali family with autosomal dominant inheritance. Ambar Chakravarty, Angshuman Mukerjee, Somaditya Banerjee and Quasar Saleem.
J. of Association of Neuroscientists of Eastern India (1996) 1: 188
- Molecular Analysis of Friedreich’s Ataxia locus in the Indian Population. M.Mukerji, S. Choudhry, Q.Saleem, M.V.Padma, M.C. Maheshwari, S. Jain
Acta Neurologica Scandinavica (2000) 102(4): 227-229
- Sample Size considerations in genetic polymorphism studies. Chandrika B. Rao. Human Heredity (2001) 52(4): 191-200
- “Spectrum of -thalassaemia mutations and their association with allelic sequence polymorphisms at the -globin gene cluster in eastern Indian population”. Ritushree Kukreti, Debasis Dash, Vineetha K E, Sanchita Chakravarty, Swapan Kr Das, Madhusnata De, Geeta Talukder. American Journal of Hematology (2002) 70(4):269-77.
- Origin and instability of GAA repeats: insights from Alu elements. Chauhan C, Dash D, Grover D, Rajamani J, Mukerji M. J Biomol Struct Dyn. 2002 Oct; 20(2):253-63.
- Spectrum of beta-thalassemia mutations and their association with allelic sequence polymorphisms at the beta-globin gene cluster in an Eastern Indian population. Kukreti R, Dash D, E VK, Chakravarty S, Das SK, De M, Talukder G Am J Hematol. 2002 Aug; 70(4):269-77.
- In silico characterization of the INO80 subfamily of SWI2/SNF2 chromatin remodeling proteins. Bakshi R, Prakash T, Dash D, Brahmachari V. Biochem Biophys Res Commun. 2004 Jul 16; 320(1):197-2.
- Comparative analysis of protein unfoldedness in human housekeeping and non-housekeeping proteins. Pandey N, Ganapathi M, Kumar K, Dasgupta D, Sutar SD, Dash D. Bioinformatics. 2004 Nov 22; 20(17):2904-10
- SMARCA2 and THAP11: potential candidates for polyglutamine disorders as evidenced from polymorphism and protein-folding simulation studies. Pandey N, Mittal U, Srivastava AK, Mukerji M. J Hum Genet. 2004; 49(11):596-602. Epub 2004 Sep 10.
- ArrayD: a general purpose software for microarray design. Sharma A, Srivastava GP, Sharma VK, Ramachandran S. BMC Bioinformatics. 2004 Oct 2;5:142.
- Founder Haplotype for Machado-Joseph Disease in the Indian Population: Novel Insights from History and Polymorphism Studies. Uma Mittal; Achal K. Srivastava; Satish Jain; Sanjeev Jain; Mitali Mukerji. Arch Neurol 2005; 62 637-640.
- Post-zygotic de novo trinucleotide repeat expansion at spinocerebellar ataxia type 7 locus: evidence from an Indian family. Mittal U, Roy S, Jain S, Srivastava AK, Mukerji M. J Hum Genet. 2005; 50(3):155-7. Epub 2005 Mar 5.
- Evidence of a Common Founder for SCA12 in the Indian Population. S. Bahl K. Virdi, U. Mittal, M. P. Sachdeva, A. K. Kalla, S. E. Holmes, E. O'Hearn, R. L. Margolis, S. Jain, A. K. Srivastava and M. Mukerji. Ann Hum Genet. 2005 Sep; 69(Pt 5):528-34.
- Insights into the mutational history and prevalence of SCA1 in the Indian population through anchored polymorphisms. Mittal U, Sharma S, Chopra R, Dheeraj K, Pal PK, Srivastava AK, Mukerji M. Hum Genet. 2005 Nov; 118(1):107-14. Epub. 2005 Oct 28.
- SPAAN: a software program for prediction of adhesins and adhesin-like proteins using neural networks. Sachdeva G, Kumar K, Jain P, Ramachandran S. Bioinformatics. 2005 Feb 15;21(4):483-91. Epub 2004 Sep 16.
- Intrinsic unstructuredness and abundance of PEST motifs in eukaryotic proteomes. Singh GP, Ganapathi M, Sandhu KS, Dash D. Proteins. 2006 Feb 1; 62(2):309-15.
- Simple sequence proteins in prokaryotic proteomes. Subramanyam MB, Gnanamani M, Ramachandran S. BMC Genomics. 2006 Jun 8;7:141.
- Conformational flexibility may explain multiple cellular roles of PEST motifs. Sandhu KS, Dash D. Proteins. 2006 Jun 1; 63(4):727-32.
- DyNAVacS: an integrative tool for optimized DNA vaccine design. Harish N, Gupta R, Agarwal P, Scaria V, Pillai B. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W264-6.
- Quadfinder: server for identification and analysis of quadruplex-forming motifs in nucleotide sequences. Scaria V, Hariharan M, Arora A, Maiti S. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W683-5.
- Bhatnagar P, Guleria R, Kukreti R. Pharmacogenomics of beta2-agonist: key focus on signaling pathways. Pharmacogenomics. 2006 Sep;7(6):919-33. Review.
- Ravi Shankar, Amit Chaurasia, Biswaroop Ghosh, Dmitry Chekmenev, Evgeny Cheremushkin, Alexander Kel, Mitali Mukerji. Non-random genomic divergence in repetitive sequences of human and chimpanzee in genes of diVerent functional categories. Mol Genet Genomics (2007) 277:441–455.
- 26. Singh GP, Ganapathi M, Dash D. Role of intrinsic disorder in transient interactions of hub proteins. Proteins. 2007 Mar 1;66(4):761-5.
- Sandhu KS, Dash D. Dynamic alpha-helices: conformations that do not conform. Proteins. 2007 Jul 1;68(1):109-22.
- Singh GP, Dash D. Intrinsic disorder in yeast transcriptional regulatory network. Proteins. 2007 Aug 15;68(3):602-5.